IMP3 output: Taxonomy

The output of the taxonomy step is mostly written to taxonomy in the Analysis directory. The exception is the output of GTDBtk, which is run on the bins selected by DASTool and has its results summarized with the bins.

Stats from the taxonomy step

The Taxonomy step does not always directly write to the Stats directory. Some of the results are summarized by the Summary. The GTDBtk results are summarized together with the results from the binning step results in Stats/<mg|mt|mgmt>/<mg|mt|mgmt>.bins.tsv.